Pre_GI: BLASTP Hits

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Query: NC_012660:2143376:2172420 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2172420, End: 2173601, Length: 1182

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011892:306437:3230163230163243141299Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeputative signal peptide9e-60231
NC_009901:4899535:4911516491151649126551140Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein5e-25115
NC_008322:2637646:2642219264221926433461128Shewanella sp. MR-7, complete genomehypothetical protein3e-22106
NC_008321:2569315:2573879257387925750061128Shewanella sp. MR-4, complete genomehypothetical protein3e-22106
NC_015663:1356982:1382021138202113832171197Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-22106
NC_015497:2997275:3001768300176830031171350Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein2e-21103
NC_004347:3437369:3442492344249234436161125Shewanella oneidensis MR-1, complete genomehypothetical protein1e-1894.4
NC_010334:4925936:4928102492810249293521251Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein9e-1891.7