Pre_GI: BLASTP Hits

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Query: NC_012583:361241:392043 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 392043, End: 392735, Length: 693

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009456:787322:871207871207871899693Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein4e-111400
NC_008542:483761:497082497082497807726Burkholderia cenocepacia HI2424 chromosome 1, complete sequencehypothetical protein6e-37154
NC_008060:2913671:292883729288372929562726Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein6e-37154
NC_014311:3076519:310040031004003101209810Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein3e-35148
NC_017267:29461:461314613146874744Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completelipoprotein7e-35147
NC_013421:1744928:175637317563731757089717Pectobacterium wasabiae WPP163, complete genomehypothetical protein8e-35147
NC_007492:3462929:346829734682973469028732Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-32139