Pre_GI: BLASTP Hits

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Query: NC_012583:361241:381724 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 381724, End: 381936, Length: 213

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012580:353273:367746367746368042297Vibrio cholerae M66-2 chromosome II, complete sequenceStress responsive alpha-beta barrel1e-35147
NC_009456:787322:882006882006882302297Vibrio cholerae O395 chromosome 1, complete sequencestress responsive A/B barrel domain family protein1e-35147
NC_013037:4623179:462279346227934623182390Dyadobacter fermentans DSM 18053, complete genomeStress responsive alpha-beta barrel domain protein5e-1476.3
NC_018748:2119679:212612621261262126509384Emticicia oligotrophica DSM 17448 chromosome, complete genomeStress responsive alpha-beta barrel domain-containing protein1e-1272