Pre_GI: BLASTP Hits

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Query: NC_012583:335000:349638 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 349638, End: 349880, Length: 243

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:49618:907549075490996243Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeprevent-host-death protein8e-41165
NC_012667:931390:995791995791996033243Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein8e-41165
NC_005139:1784000:187748718774871877729243Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-32136
NC_008345:4107847:413248341324834132743261Shewanella frigidimarina NCIMB 400, complete genomeprevent-host-death family protein1e-1168.2
NC_008750:450233:453943453943454203261Shewanella sp. W3-18-1, complete genomeprevent-host-death family protein3e-1167.4
NC_019940:424000:429627429627429917291Thioflavicoccus mobilis 8321 chromosome, complete genomeprevent-host-death family protein2e-0754.3