Pre_GI: BLASTP Hits

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Query: NC_012580:301500:319559 Vibrio cholerae M66-2 chromosome II, complete sequence

Start: 319559, End: 320101, Length: 543

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:931390:999047999047999649603Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein5e-105379
NC_016446:49618:871598715987740582Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein6e-105379
NC_017269:303500:305178305178305714537Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein3e-97353
NC_013456:1819421:183904218390421839668627Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein4e-65246
NC_017986:5421000:542952154295215430105585Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-36151
NC_017033:1672313:168887416888741689437564Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein7e-34143
NC_009512:3118907:312610831261083126623516Pseudomonas putida F1, complete genomeprotein of unknown function DUF9251e-32139
NC_016628:1190366:120749912074991208044546Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein3e-32137
NC_016593:2447938:246804624680462468627582Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-25115
NC_020210:2969862:298083229808322981413582Geobacillus sp. GHH01, complete genomehypothetical protein2e-24111
NC_008062:81338:886078860789173567Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceprotein of unknown function DUF9252e-1995.1
NC_008544:55451:664266642666992567Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceprotein of unknown function DUF9252e-1995.1
NC_020995:789665:805428805428806018591Enterococcus casseliflavus EC20, complete genomehypothetical protein5e-1477.4
NC_007645:2049988:206306220630622063520459Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-0652.4