Pre_GI: BLASTP Hits

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Query: NC_012125:4559990:4572770 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 4572770, End: 4573201, Length: 432

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4513900:452414045241404524679540Salmonella enterica subsp. enterica serovar Typhi str. CT18,Vi polysaccharide biosynthesis protein7e-79291
NC_004631:4494000:450694945069494507488540Salmonella enterica subsp. enterica serovar Typhi Ty2, completeVi polysaccharide biosynthesis protein7e-79291
NC_016832:4482437:449521744952174495375159Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Vi polysaccharide biosynthesis protein tviA4e-24109