Pre_GI: BLASTP Hits

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Query: NC_012125:4481808:4492998 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 4492998, End: 4493915, Length: 918

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4486433:449755444975544498540987Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein9e-176615
NC_011149:4474012:448510844851084486025918Salmonella enterica subsp. enterica serovar Agona str. SL483,putative periplasmic protein6e-175613
NC_011083:4547825:4558804455880445598051002Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative periplasmic protein9e-175612
NC_010102:4477836:448918544891854490102918Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-169595