Pre_GI: BLASTP Hits

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Query: NC_012125:2826624:2863142 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2863142, End: 2863480, Length: 339

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2857699:288261028826102882948339Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-60229
NC_016856:2896630:294816129481612948499339Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-56217
NC_010102:2881714:289225028922502892405156Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1995.1