Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1338675 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1338675, End: 1339076, Length: 402

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:609464:621303621303621884582Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Eae protein6e-24109
NC_016860:364981:371911371911372420510Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1477.4
NC_013361:1558423:156453915645391565168630Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-1475.9
NC_007946:2625461:263531026353102635846537Escherichia coli UTI89, complete genomehypothetical protein4e-0856.6