Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1337107 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1337107, End: 1337901, Length: 795

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:2180598:218314821831482183885738Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-66250
NC_013850:1887556:190523519052351905900666Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-26119
NC_011283:4212000:421630142163014216966666Klebsiella pneumoniae 342 chromosome, complete genomeEad domain protein3e-26118
NC_011094:593100:603941603941604384444Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1685.9
NC_004431:1401681:140248814024881402817330Escherichia coli CFT073, complete genomehypothetical protein3e-1685.5
NC_016845:1285435:129941712994171300091675Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,RelE family toxin-antitoxin system3e-1272.4