Pre_GI: BLASTP Hits

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Query: NC_011989:594353:602603 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 602603, End: 602803, Length: 201

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008595:1176658:118710711871071187313207Mycobacterium avium 104, complete genomehypothetical protein9e-1268.9
NC_014643:195948:201860201860202057198Rothia dentocariosa ATCC 17931 chromosome, complete genomehypothetical protein1e-1065.1
NC_014006:2932959:293621629362162936413198Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein1e-1065.1
NC_011901:625712:645298645298645495198Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-0962
NC_011761:1357799:137157213715721371769198Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein6e-0959.7
NC_011206:1233985:125727812572781257475198Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein7e-0959.3
NC_011206:200000:216689216689216886198Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein2e-0858.2
NC_018691:198909:221907221907222116210Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein2e-0754.7
NC_010524:674216:677700677700677906207Leptothrix cholodnii SP-6, complete genomehypothetical protein4e-0650.1