Pre_GI: BLASTP Hits

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Query: NC_011989:2795811:2803578 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2803578, End: 2804633, Length: 1056

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:2216926:2225356222535622264081053Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1376.3
NC_007645:4423507:4429095442909544302101116Hahella chejuensis KCTC 2396, complete genome3-oxoacyl-(acyl-carrier-protein) synthase6e-1168.9
NC_015711:8169752:820197482019748202936963Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-1065.5
NC_008095:2420066:2430243243024324313071065Myxococcus xanthus DK 1622, complete genomehypothetical protein4e-0962.8
NC_008095:6323456:6339850633985063408991050Myxococcus xanthus DK 1622, complete genomehypothetical protein2e-0860.1
NC_015711:3546500:3555747355574735568381092Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-0858.9
NC_014355:1865003:1906605190660519076421038Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-0654.3
NC_020126:7451894:7461992746199274630471056Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-0653.9
NC_015761:2982000:2990919299091929919741056Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-0653.1
NC_020126:8885518:8894708889470888957781071Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-0652.8