Pre_GI: BLASTP Hits

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Query: NC_011988:924721:946525 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 946525, End: 947331, Length: 807

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016047:2150000:216478021647802165511732Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completebeta-glucanase5e-34144
NC_019842:3755275:375659737565973757328732Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,BglS7e-34144
NC_020272:162779:185124185124185855732Bacillus amyloliquefaciens IT-45, complete genomeendo-beta-1,3-1,4 glucanase1e-33143
UCMB5137:2054735:208146720814672082198732Bacillus atrophaeus UCMB-5137endo-beta-1,3-1,4 glucanase1e-32140
NC_015690:3941113:401425540142554014968714Paenibacillus mucilaginosus KNP414 chromosome, complete genomeGluB9e-28124
NC_016935:1365463:143366314336631434376714Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein GluB1e-27123
NC_016826:1783828:178579317857931786509717Streptococcus infantarius subsp. infantarius CJ18 chromosome,Endo-beta-1,3-1,4 glucanase (Licheninase)2e-21103
NC_008358:2808299:281265828126582813542885Hyphomonas neptunium ATCC 15444, complete genomeputative licheninase4e-2098.6
NC_014815:4385759:4399024439902444011382115Micromonospora sp. L5 chromosome, complete genomeglycoside hydrolase family 168e-1271.2
NC_007908:4069150:4081680408168040834611782Rhodoferax ferrireducens T118, complete genomeglycoside hydrolase, family 168e-1270.9
NC_017955:3057592:3084937308493730870542118Modestobacter marinus, complete genomeglycoside hydrolase, family 16; Concanavalin A-like lectin domain2e-0859.7
NC_013410:1285857:1285857128585712869031047Fibrobacter succinogenes subsp. succinogenes S85 chromosome,licheninase2e-0756.6
NC_016935:1365463:1423474142347414283094836Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein BglA24e-0755.5
NC_015690:3941113:4004066400406640089014836Paenibacillus mucilaginosus KNP414 chromosome, complete genomeBglA25e-0755.1
NC_015433:791364:7913647913647956234260Streptococcus suis ST3 chromosome, complete genomeLPXTG-motif cell wall anchor domain-containing protein2e-0653.1