Pre_GI: BLASTP Hits

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Query: NC_011982:206784:218078 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 218078, End: 218695, Length: 618

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011982:206784:2081592081592095801422Agrobacterium vitis S4 plasmid pTiS4, complete sequencetransposase7e-50196
NC_015064:1984662:2006270200627020077031434Acidobacterium sp. MP5ACTX9 chromosome, complete genometransposase IS4 family protein7e-35147
NC_013508:3188978:321553132155313216289759Edwardsiella tarda EIB202, complete genomeputative transposase1e-24112
NC_002942:675829:6938216938216952271407Legionella pneumophila subsp. pneumophila str. Philadelphia 1,hypothetical protein7e-1787
NC_018012:4221612:4233362423336242347351374Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein1e-1583.2
NC_021150:4201965:422616442261644226868705Azotobacter vinelandii CA6, complete genometransposase2e-1479.3
NC_012560:4201969:422616842261684226872705Azotobacter vinelandii DJ, complete genometransposase2e-1479.3
NC_010529:296500:301178301178301948771Cupriavidus taiwanensis plasmid pRALTA, complete sequencetransposase, IS4 family6e-1477.4
NC_013194:102000:1183211183211196461326Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein6e-1477.4
NC_019902:2372097:2375856237585623781712316Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative transposase6e-1477.4
NC_013194:963735:9811599811599824841326Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein5e-1477.4
NC_006513:148950:1534361534361547281293Azoarcus sp. EbN1, complete genometransposase, is4 family8e-1477
NC_006513:38818:4097640976422681293Azoarcus sp. EbN1, complete genomeputative transposase, is4 family8e-1477
NC_013851:3166969:3175505317550531768361332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein2e-1375.5
NC_013851:608089:6126696126696140001332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein2e-1375.5
NC_013851:3478153:3486974348697434883051332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein2e-1375.5
NC_008781:3302934:330379933037993304680882Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein9e-1373.6
NC_013851:608089:6196996196996210301332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein5e-1270.9
NC_013851:2317091:2323976232397623253071332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein5e-1270.9
NC_008786:1553833:1569918156991815713061389Verminephrobacter eiseniae EF01-2, complete genometransposase, IS4 family protein6e-1270.9
NC_008786:492363:5112585112585123941137Verminephrobacter eiseniae EF01-2, complete genome7e-1270.5
NC_008508:2572450:258394725839472584678732Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, ISLbp112e-1168.9
NC_008510:2605500:261720826172082617939732Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, ISLbp119e-1166.6
NC_008786:4040864:4045582404558240469011320Verminephrobacter eiseniae EF01-2, complete genometransposase, IS4 family protein7e-1063.9
NC_019892:5368096:5369424536942453708091386Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase family protein2e-0858.9
NC_008687:133728:147370147370148221852Paracoccus denitrificans PD1222 chromosome 2, complete sequencehypothetical protein7e-0753.9