Pre_GI: BLASTP Hits

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Query: NC_011982:130199:144222 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 144222, End: 145484, Length: 1263

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017143:54767:7270672706740221317Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-010, completereplication protein C2e-1687.4
NC_017136:54751:7269072690740061317Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, completereplication protein C2e-1687.4
NC_017134:54783:7272272722740381317Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, completereplication protein C2e-1687.4
NC_017130:54759:7269872698740141317Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, completereplication protein C2e-1687.4
NC_017117:54767:7270672706740221317Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-010, completereplication protein C2e-1687.4
NC_017101:54767:7270672706740221317Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, completereplication protein C2e-1687.4
NC_013210:57881:7307873078743941317Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, completereplication protein C2e-1687.4
NC_011987:53760:5733357333586281296Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencereplication protein C4e-1686.3