Pre_GI: BLASTP Hits

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Query: NC_011961:891815:912687 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 912687, End: 913187, Length: 501

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016604:3184855:321888432188843219366483Mycobacterium rhodesiae NBB3 chromosome, complete genomecupin domain-containing protein1e-34145
NC_008705:1839983:186222818622281862716489Mycobacterium sp. KMS, complete genomeCupin 2, conserved barrel domain protein3e-33140
NC_008705:1839983:184881318488131849301489Mycobacterium sp. KMS, complete genomeCupin 2, conserved barrel domain protein3e-33140
NC_007005:2191500:220009522000952200541447Pseudomonas syringae pv. syringae B728a, complete genomeunnamed protein product; weakly similar to gentisate 1,2-dioxygenase2e-1581.3
NC_014623:6150028:6175413617541361767141302Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-1270.9
NC_014098:2332938:2350885235088523519941110Bacillus tusciae DSM 2912 chromosome, complete genomeCupin 2 conserved barrel domain protein3e-1167.8
NC_016947:1480282:1494262149426214953741113Mycobacterium intracellulare MOTT-02 chromosome, complete genomecupin1e-1065.9
NC_009077:4419084:4439267443926744403791113Mycobacterium sp. JLS, complete genomeCupin 2, conserved barrel domain protein4e-1063.9
NC_017167:1648913:1762544176254417636351092Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1cupin2e-0961.6
NC_015518:997707:999438999438999983546Acidianus hospitalis W1 chromosome, complete genomeCupin 2 barrel domain-containing protein4e-0960.5
NC_015435:251958:255726255726256271546Metallosphaera cuprina Ar-4 chromosome, complete genomecupin 2 domain-containing protein5e-0960.5