Pre_GI: BLASTP Hits

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Query: NC_011961:891815:893478 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 893478, End: 894059, Length: 582

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016884:813000:828427828427829083657Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein3e-30131
NC_015757:2844599:284918228491822849838657Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein3e-30131
NC_011894:6888562:692348169234816924206726Methylobacterium nodulans ORS 2060, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding1e-21102
NC_012721:770651:814249814249814944696Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein4e-1994.4
NC_021150:4929670:496404449640444964715672Azotobacter vinelandii CA6, complete genomehypothetical protein2e-1892
NC_012560:4929683:496405749640574964728672Azotobacter vinelandii DJ, complete genomehypothetical protein2e-1892
NC_009654:91096:968169681697466651Marinomonas sp. MWYL1, complete genomehypothetical protein8e-1890.1
NC_008726:4672850:468677146867714687433663Mycobacterium vanbaalenii PYR-1, complete genomepyridoxamine 5'-phosphate oxidase-related, FMN-binding2e-1478.6
NC_011979:1062457:107727410772741077735462Geobacter sp. FRC-32, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding1e-1065.9
NC_007498:197810:210015210015210488474Pelobacter carbinolicus DSM 2380, complete genomepredicted flavin-nucleotide-binding protein6e-0960.5
NC_016629:2561000:256285625628562563344489Desulfovibrio africanus str. Walvis Bay chromosome, completepyridoxamine 5'-phosphate oxidase-related FMN-binding protein7e-0857
NC_007955:1198994:122088912208891221347459Methanococcoides burtonii DSM 6242, complete genomepyridoxamine 5'-phosphate oxidase-related, FMN-binding8e-0857
NC_014299:218252:233466233466234041576Halalkalicoccus jeotgali B3 plasmid 2, complete sequencepyridoxamine 5'-phosphate oxidase-related FMN-binding protein2e-0755.8
NC_009495:2479465:250745325074532507947495Clostridium botulinum A str. ATCC 3502 chromosome, complete genomenitroimidazole resistance protein2e-0652