Pre_GI: BLASTP Hits

Some Help

Query: NC_011961:528837:543848 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 543848, End: 544261, Length: 414

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:3206688:322143332214333221999567Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1477
NC_009142:2963831:297500129750012975414414Saccharopolyspora erythraea NRRL 2338, complete genomeputative oxidoreductase2e-1064.7
NC_009142:4046376:405934840593484059770423Saccharopolyspora erythraea NRRL 2338, complete genomepyridoxamine 5'-phosphate oxidase-related,FMN-binding protein4e-1063.5
NC_007777:2459357:247879524787952479184390Frankia sp. CcI3, complete genomepyridoxamine 5'-phosphate oxidase-related, FMN-binding1e-0858.9
NC_013922:2110894:212762421276242128025402Natrialba magadii ATCC 43099 chromosome, complete genomeputative F420-dependent enzyme4e-0856.6
NC_017093:5225864:523707752370775237466390Actinoplanes missouriensis 431, complete genomeputative pyridoxamine 5'-phosphate oxidase-related protein2e-0650.8
NC_017186:6817904:683885068388506839320471Amycolatopsis mediterranei S699 chromosome, complete genomepyridoxamine 5'-phosphate oxidase3e-0650.8
NC_014318:6817860:683880668388066839276471Amycolatopsis mediterranei U32 chromosome, complete genomepyridoxamine 5'-phosphate oxidase3e-0650.8