Pre_GI: BLASTP Hits

Some Help

Query: NC_011959:972798:988482 Thermomicrobium roseum DSM 5159, complete genome

Start: 988482, End: 988931, Length: 450

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010725:3917369:392533939253393925896558Methylobacterium populi BJ001, complete genomeheat shock protein Hsp203e-1477.4
NC_010725:3961981:397180439718043972361558Methylobacterium populi BJ001, complete genomeheat shock protein Hsp203e-1477.4
NC_012988:1459961:150190315019031502460558Methylobacterium extorquens DM4, complete genomemolecular chaperone, heat shock Hsp20 family1e-1271.6
NC_015681:102000:119757119757120197441Thermodesulfatator indicus DSM 15286 chromosome, complete genomeheat shock protein Hsp204e-1270.5
NC_013385:1064188:108810510881051088551447Ammonifex degensii KC4, complete genomeheat shock protein Hsp206e-1269.7
NC_019892:5171629:519004951900495190654606Singulisphaera acidiphila DSM 18658 chromosome, complete genomemolecular chaperone8e-1165.9
NC_011761:1412420:141867014186701419116447Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeheat shock protein, Hsp20 family2e-1064.7
NC_011206:1293880:130048813004881300934447Acidithiobacillus ferrooxidans ATCC 53993, complete genomeheat shock protein Hsp202e-1064.7
NC_009455:820821:825516825516826004489Dehalococcoides sp. BAV1 chromosome, complete genomeheat shock protein Hsp204e-1063.5
NC_020387:796253:799101799101799589489Dehalococcoides mccartyi BTF08, complete genomeheat shock protein, Hsp20 family4e-1063.5
NC_009485:8187321:819228381922838192723441Bradyrhizobium sp. BTAi1 chromosome, complete genomesmall heat-shock protein molecular chaperone6e-1063.2
NC_008048:389645:395730395730396230501Sphingopyxis alaskensis RB2256, complete genomeheat shock protein Hsp205e-1063.2
NC_015185:592598:595231595231595737507Desulfurobacterium thermolithotrophum DSM 11699 chromosome,heat shock protein Hsp207e-1062.8
NC_010625:1513436:153090415309041531377474Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceheat shock protein Hsp201e-0962
NC_011894:4934304:494639349463934947007615Methylobacterium nodulans ORS 2060, complete genomeheat shock protein Hsp202e-0961.2
NC_017075:2293209:229687622968762297382507Rubrivivax gelatinosus IL144, complete genomeputative small heat-shock protein4e-0960.5
NC_016616:1534983:155981315598131560271459Dechlorosoma suillum PS chromosome, complete genomemolecular chaperone1e-0858.9
NC_009929:58465:821708217082655486Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceheat shock protein (HSP20) family protein1e-0858.5
NC_007722:851129:855819855819856319501Erythrobacter litoralis HTCC2594, complete genomesmall heat shock protein2e-0858.2
NC_002932:1851070:186817518681751868603429Chlorobium tepidum TLS, complete genomeheat shock protein, Hsp20 family2e-0858.2
NC_007333:1743890:175862317586231759084462Thermobifida fusca YX, complete genomeheat shock protein, class I2e-0858.2
NC_013921:2293411:229341122934112293848438Thermoanaerobacter italicus Ab9 chromosome, complete genomeheat shock protein Hsp202e-0857.8
NC_014759:2883500:288353828835382883978441Marivirga tractuosa DSM 4126 chromosome, complete genomeheat shock protein hsp204e-0857
NC_020260:882307:909923909923910492570Cronobacter sakazakii Sp291, complete genomemolecular chaperone6e-0856.6
NC_012988:1459961:149736014973601497872513Methylobacterium extorquens DM4, complete genomemolecular chaperone, heat shock Hsp20 family8e-0855.8
NC_008687:302450:324049324049324552504Paracoccus denitrificans PD1222 chromosome 2, complete sequenceheat shock protein Hsp201e-0755.8
NC_015740:4508375:451132045113204511889570Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completemolecular chaperone1e-0755.5
NC_016609:2730449:274641327464132746847435Niastella koreensis GR20-10 chromosome, complete genomeheat shock protein Hsp202e-0755.1
NC_011901:3072817:309758730975873098018432Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeHSP20 family protein2e-0755.1
NC_011886:1891077:191123319112331911700468Arthrobacter chlorophenolicus A6, complete genomeheat shock protein Hsp202e-0754.3
NC_014315:3004125:300614430061443006590447Nitrosococcus watsoni C-113 chromosome, complete genomeheat shock protein Hsp203e-0753.9
NC_007519:3355768:337207633720763372645570Desulfovibrio alaskensis G20 chromosome, complete genomesmall HspC2 heat shock protein5e-0753.1
NC_016616:1534983:155291615529161553485570Dechlorosoma suillum PS chromosome, complete genomemolecular chaperone7e-0752.8
NC_010804:996837:102501110250111025580570Burkholderia multivorans ATCC 17616 chromosome 1, completeputative molecular chaperone1e-0652.4
NC_010084:2484000:249919324991932499762570Burkholderia multivorans ATCC 17616 chromosome 1, completeheat shock protein Hsp201e-0652.4
NC_008048:389645:403230403230403655426Sphingopyxis alaskensis RB2256, complete genomeheat shock protein Hsp201e-0652.4
NC_015387:155728:157211157211157627417Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeheat shock protein Hsp209e-0752.4
NC_007955:2074844:208504220850422085503462Methanococcoides burtonii DSM 6242, complete genomeheat shock protein Hsp201e-0652
NC_016147:1961000:196113219611321961533402Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeheat shock protein, Hsp20 family2e-0651.6
NC_015259:673662:689633689633690058426Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHeat shock protein Hsp202e-0651.6
NC_018012:4184500:418587241858724186375504Thiocystis violascens DSM 198 chromosome, complete genomemolecular chaperone2e-0651.6
NC_010814:155834:171161171161171610450Geobacter lovleyi SZ, complete genomeheat shock protein Hsp202e-0651.2
NC_014962:3440826:344743634474363447903468Isosphaera pallida ATCC 43644 chromosome, complete genomeheat shock protein Hsp202e-0651.2
NC_020409:393329:422025422025422441417Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeHeat shock protein HSP203e-0650.8
NC_015259:673662:688708688708689199492Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHeat shock protein Hsp203e-0650.4
NC_013595:5333000:533730553373055337736432Streptosporangium roseum DSM 43021, complete genomeMolecular chaperone (small heat shock protein)- like protein6e-0649.7
NC_012438:192065:211240211240211575336Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeheat shock protein, Hsp20 family9e-0648.9