Pre_GI: BLASTP Hits

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Query: NC_011770:3163480:3196734 Pseudomonas aeruginosa LESB58, complete genome

Start: 3196734, End: 3198347, Length: 1614

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:2168523:2171531217153121731231593Pseudomonas fluorescens F113 chromosome, complete genomeprotein PvdP0661
NC_010995:2123909:2136381213638121379911611Cellvibrio japonicus Ueda107, complete genomehypothetical protein2e-172606
NC_021150:2546000:2549087254908725505531467Azotobacter vinelandii CA6, complete genomePvdJ/PvdD/PvdP-like protein6e-140498
NC_012560:2546000:2549075254907525505411467Azotobacter vinelandii DJ, complete genomePvdJ/PvdD/PvdP-like protein6e-140498