Pre_GI: BLASTP Hits

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Query: NC_011770:2804218:2816136 Pseudomonas aeruginosa LESB58, complete genome

Start: 2816136, End: 2817446, Length: 1311

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2751342:2769752276975227710591308Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transporter, membrane protein1e-131469
NC_016616:1182125:1187063118706311884001338Dechlorosoma suillum PS chromosome, complete genomearabinose efflux permease family protein2e-89329
NC_010943:9294:3122031220325541335Stenotrophomonas maltophilia K279a, complete genomeputative MFS family transporter protein2e-86320
NC_009380:3384737:3396406339640633977341329Salinispora tropica CNB-440 chromosome, complete genomemajor facilitator transporter2e-69263
NC_006361:2920028:2937977293797729392241248Nocardia farcinica IFM 10152, complete genomeputative transporter1e-68260
NC_012668:3037345:304679030467903047173384Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-56219
NC_020911:1776670:1778183177818317795051323Octadecabacter antarcticus 307, complete genomeputative MFS-type transporter1e-51204
NC_008254:2496622:251445525144552515378924Mesorhizobium sp. BNC1, complete genomeputative NreB protein2e-43177
NC_020157:36234:4601746017474081392Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencemajor facilitator superfamily MFS_12e-34147
NC_013411:681907:6884026884026896731272Geobacillus sp. Y412MC61, complete genomemajor facilitator superfamily MFS_14e-0653.1
NC_014915:2900209:2914262291426229155331272Geobacillus sp. Y412MC52 chromosome, complete genomemajor facilitator superfamily MFS_14e-0653.1