Pre_GI: BLASTP Hits

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Query: NC_011770:2690501:2709421 Pseudomonas aeruginosa LESB58, complete genome

Start: 2709421, End: 2710008, Length: 588

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:4368356:437433743743374374924588Pseudomonas fluorescens Pf-5, complete genomephage D3 protein3e-91333
NC_011283:2836000:290201929020192902615597Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-36152
NC_009648:1541699:156088115608811561477597Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-35149
NC_013850:2182337:220551122055112206107597Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF13677e-35146
NC_009792:1770106:177774617777461778345600Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-35146
NC_015761:1017301:101886610188661019468603Salmonella bongori NCTC 12419, complete genomebacteriophage protein3e-34144
NC_011080:2761403:276456527645652765167603Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-2 prophage protein1e-33142
NC_016856:2812905:281606728160672816669603Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-33142
NC_017046:2756000:276159827615982762200603Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein1e-33142
NC_009708:2537557:254764525476452548238594Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-33141
NC_016514:2476359:249966024996602500262603Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-32139
NC_015424:2316228:232593823259382326525588Aeromonas veronii B565 chromosome, complete genomebacteriophage protein4e-32137
NC_020211:2094500:210682921068292107425597Serratia marcescens WW4, complete genomehypothetical protein2e-28125
NC_008563:1475500:148148314814831482082600Escherichia coli APEC O1, complete genomehypothetical bacteriophage protein3e-27121
CP002516:2580774:258882025888202589419600Escherichia coli KO11, complete genomeprotein of unknown function DUF13678e-27120
NC_016902:2580774:258882025888202589419600Escherichia coli KO11FL chromosome, complete genomehypothetical protein8e-27120
NC_011205:1345511:136710913671091367708600Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-26119
NC_011294:1220526:123119712311971231796600Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-26119
NC_016831:1734292:174595217459521746551600Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-26119
NC_011294:1465500:147637514763751476974600Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-26119
NC_002655:2142587:214757821475782148177600Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R1e-26119
NC_002695:1929215:193898819389881939587600Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-26119
NC_011415:1472500:149298914929891493588600Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-26119
NC_003198:1908238:191622819162281916827600Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-26117
NC_012214:1974500:198613619861361986735600Erwinia pyrifoliae Ep1/96, complete genomeputative bacteriophage protein1e-24112
NC_009801:2193000:219955521995552200151597Escherichia coli E24377A, complete genomehypothetical protein2e-23108
NC_011415:2277559:228598022859802286576597Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-23108
NC_012779:1939747:195351319535131954157645Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1581.6
NC_012917:2641000:265518826551882655835648Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-1478.2
NC_009655:1357486:137278013727801373415636Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein6e-1270.5