Pre_GI: BLASTP Hits

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Query: NC_011770:2499432:2515459 Pseudomonas aeruginosa LESB58, complete genome

Start: 2515459, End: 2517183, Length: 1725

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015711:2050360:2064044206404420657621719Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein8e-120431
NC_011958:1031592:103742410374241038389966Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein3e-47190
NC_011386:136223:1535621535621551691608Oligotropha carboxidovorans OM5, complete genomenuclease-related domain family1e-45184
NC_015684:362236:3735403735403751471608Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-45184
NC_013526:567500:5709215709215726001680Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeNERD domain protein2e-44180
NC_016609:6750111:6766505676650567681961692Niastella koreensis GR20-10 chromosome, complete genomeNERD domain-containing protein2e-38161
NC_008146:861319:9144129144129161031692Mycobacterium sp. MCS, complete genomehypothetical protein2e-37157
NC_008705:868623:9231419231419248321692Mycobacterium sp. KMS, complete genomeconserved hypothetical protein2e-37157
NC_017955:4075804:4085074408507440867141641Modestobacter marinus, complete genomenuclease4e-37156
NC_010622:249625:2709012709012726401740Burkholderia phymatum STM815 chromosome 1, complete sequenceNERD domain protein3e-36154
NC_014151:3687612:3692966369296636946331668Cellulomonas flavigena DSM 20109 chromosome, complete genomeNERD domain protein8e-36152
NC_017068:1401352:1436468143646814381351668Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein5e-36152
NC_016906:181254:2298072298072314591653Gordonia polyisoprenivorans VH2 chromosome, complete genomenuclease-related domain-containing protein1e-35151
NC_017078:247045:2618732618732636031731Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein2e-34147
NC_008435:2368000:2394634239463423963551722Rhodopseudomonas palustris BisA53, complete genomehypothetical protein1e-29131
NC_020126:5558613:5570088557008855718271740Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-26120
NC_008228:4915500:4924775492477549265951821Pseudoalteromonas atlantica T6c, complete genomeNERD domain-containing family protein5e-23109
NC_008260:1885969:1904538190453819064331896Alcanivorax borkumensis SK2, complete genomeHypotetical protein2e-1894.4
NC_008781:2883968:289717628971762898150975Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein1e-1791.7
NC_015726:3452232:3455641345564134574731833Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-1790.9
NC_012521:1:1788417884195781695Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein6e-1789.4
NC_014666:8488567:8500332850033285020321701Frankia sp. EuI1c chromosome, complete genomeNERD domain protein3e-1687.4
NC_011662:317831:3199873199873216091623Thauera sp. MZ1T, complete genomeNERD domain protein2e-1584.3
NC_010995:764567:7645677645677664021836Cellvibrio japonicus Ueda107, complete genomeputative DNA helicase II3e-1583.6
NC_016935:7872425:7878284787828478802091926Paenibacillus mucilaginosus 3016 chromosome, complete genomeNERD domain-containing protein3e-1480.5
NC_015690:7785875:7806015780601578079401926Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNERD domain-containing protein4e-1480.5
NC_014924:3334386:3341593334159333434701878Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein2e-1378.2
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein2e-1378.2
NC_003296:140889:1483601483601501981839Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein4e-1376.6
NC_014310:94645:99969999691018071839Ralstonia solanacearum PSI07 megaplasmid, complete sequencehelicase protein9e-1375.5
NC_019902:3397170:3401800340180034035691770Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II; NERD domain-containing protein1e-1275.1
NC_011901:1860887:1879189187918918810481860Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDNA helicase II8e-1272.4
NC_011274:4577402:4588873458887345907141842Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type I restriction enzyme1e-1172
NC_011294:4604283:4615608461560846174491842Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction enzyme1e-1172
NC_016002:2946702:2979398297939829810291632Pseudogulbenkiania sp. NH8B, complete genomeNERD domain containing protein2e-1171.6
NC_011205:4761598:4772922477292247747631842Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA helicase II3e-1170.5
NC_016831:4556761:4568232456823245700731842Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Type I restriction enzyme6e-1169.7
NC_013716:5201097:5253209525320952550231815Citrobacter rodentium ICC168, complete genomeputative DNA helicase1e-1068.6
NC_011748:3360967:3398367339836734001541788Escherichia coli 55989, complete genomeputative UvrD/REP helicase3e-1067.4
CU928145:3360967:3398367339836734001541788Escherichia coli 55989 chromosome, complete genomeputative UvrD/REP helicase3e-1067.4
NC_007974:2097334:2160214216021421626162403Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein3e-1067
NC_014391:1812500:1824628182462818261481521Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNERD domain-containing protein1e-0965.1
NC_007511:1300978:1302594130259413042611668Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-0964.3
NC_014924:2399524:2419707241970724213531647Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein5e-0653.5