Pre_GI: BLASTP Hits

Some Help

Query: NC_011769:820521:833371 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 833371, End: 836022, Length: 2652

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012918:2896671:2900558290055829032062649Geobacter sp. M21 chromosome, complete genomePEP-CTERM system TPR-repeat lipoprotein2e-85318
NC_011146:1998981:2035913203591320385612649Geobacter bemidjiensis Bem, complete genomePEP-CTERM system TPR-repeat lipoprotein6e-82306
NC_007517:2241104:2274011227401122766622652Geobacter metallireducens GS-15, complete genomeTPR repeat protein7e-82306
NC_007517:1676604:1706070170607017082592190Geobacter metallireducens GS-15, complete genomeTetratricopeptide TPR_48e-25116
NC_013960:3326955:3341281334128133440732793Nitrosococcus halophilus Nc4 chromosome, complete genomePEP-CTERM system TPR-repeat lipoprotein5e-22107
NC_012108:2305327:2331317233131723335992283Desulfobacterium autotrophicum HRM2, complete genometetratricopeptide (TPR) domain protein8e-21103
NC_014315:1956695:1967644196764419704392796Nitrosococcus watsoni C-113 chromosome, complete genomePEP-CTERM system TPR-repeat lipoprotein5e-1894
NC_015422:704500:7531597531597559392781Alicycliphilus denitrificans K601 chromosome, complete genomePEP-CTERM system TPR-repeat lipoprotein3e-1584.7
NC_014216:2054860:2080319208031920826822364Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeTPR repeat-containing protein5e-1584
NC_005071:1903581:1913984191398419164732490Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat:HAT (Half-A-TPR) repeat3e-1481.3
NC_014355:3398033:3425448342544834271331686Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-1481.3
NC_008820:1659612:1678311167831116811212811Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein6e-1480.1
NC_005071:1903581:1911797191179719138722076Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat1e-1379.3
NC_011894:2503639:2517451251745125199072457Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p202e-1379
NC_007759:415456:4403154403154422641950Syntrophus aciditrophicus SB, complete genomeTPR repeat-containing protein2e-1379
NC_010511:637214:6417186417186448883171Methylobacterium sp. 4-46 chromosome, complete genomepeptidase C14 caspase catalytic subunit p202e-1378.6
NC_014972:322056:3226073226073248832277Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein6e-1377
NC_013665:1591081:1601818160181816042352418Methanocella paludicola SANAE, complete genomehypothetical protein1e-1275.9
NC_008312:2264832:2264832226483222700455214Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 22e-1275.5
NC_011894:2549076:2561841256184125649093069Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-1274.7
NC_015510:6373937:6396170639617063972611092Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein3e-1274.7
NC_011894:3029964:3038773303877330411272355Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p205e-1273.9
NC_014972:1035124:1045768104576810479032136Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein8e-1273.2
NC_008312:2264832:2281661228166122831211461Trichodesmium erythraeum IMS101, complete genomeTPR repeat9e-1273.2
NC_011894:6295807:6299486629948663026563171Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-1171.6
NC_010625:1551430:1562657156265715652002544Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceTetratricopeptide TPR_2 repeat protein3e-1171.2
NC_012225:2834642:2844286284428628467392454Brachyspira hyodysenteriae WA1, complete genomeputative TPR domain-containing protein1e-1069.7
NC_013887:213699:214472214472215398927Methanocaldococcus sp. FS406-22 chromosome, complete genomeTPR repeat-containing protein2e-1068.6
NC_014355:2321957:2348059234805923504762418Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1068.6
NC_011894:7421867:7434437743443774374032967Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-1068.2
NC_008576:2011959:2028673202867320315792907Magnetococcus sp. MC-1, complete genomeTetratricopeptide TPR_2 repeat protein2e-1068.2
NC_020541:3156500:3187466318746631902732808Rhodanobacter sp. 2APBS1, complete genomeputative PEP-CTERM system TPR-repeat lipoprotein5e-1067.4
NC_012483:30784:6092160921621021182Acidobacterium capsulatum ATCC 51196, complete genomeTPR domain protein2e-0965.1
NC_012881:4097552:4097552409755240993031752Desulfovibrio salexigens DSM 2638, complete genomeTetratricopeptide TPR_2 repeat protein2e-0965.1
NC_019942:112182:1333601333601351501791Aciduliprofundum sp. MAR08-339, complete genometetratricopeptide repeat protein3e-0964.3
NC_008312:2511500:2521887252188725236711785Trichodesmium erythraeum IMS101, complete genomeTPR repeat4e-0964.3
NC_013889:2603914:2625439262543926282462808Thioalkalivibrio sp. K90mix chromosome, complete genomePEP-CTERM system TPR-repeat lipoprotein4e-0964.3
NC_014408:1018448:1026328102632810275481221Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein9e-0963.2
NC_008789:1641774:1659845165984516624662622Halorhodospira halophila SL1, complete genomeTetratricopeptide TPR_2 repeat protein3e-0861.6
NC_011726:1911500:1927111192711119281451035Cyanothece sp. PCC 8801, complete genomeTPR repeat-containing protein3e-0861.2
NC_013161:1878700:1896938189693818979721035Cyanothece sp. PCC 8802, complete genomeTetratricopeptide TPR_2 repeat protein3e-0861.2
NC_013156:154233:165112165112166050939Methanocaldococcus fervens AG86, complete genomeTPR repeat-containing protein4e-0860.8
NC_008820:2512518:2518732251873225201201389Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-0860.8
NC_011729:1496848:1496848149684815006783831Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein6e-0860.5
NC_003454:249304:2679022679022697881887Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTetratricopeptide repeat family protein5e-0860.5
NC_015572:1421782:1441028144102814434422415Methylomonas methanica MC09 chromosome, complete genomehypothetical protein7e-0860.1
NC_000916:31459:5142651426525651140Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase1e-0759.7
NC_014010:1392536:1444174144417414464802307Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein1e-0759.7
NC_008255:1500067:1519865151986515214121548Cytophaga hutchinsonii ATCC 33406, complete genomeTPR repeat-containing protein1e-0759.3
NC_007645:2779381:2823606282360628262602655Hahella chejuensis KCTC 2396, complete genomeFOG: TPR repeat2e-0758.5
NC_014253:1197005:1209723120972312121342412Methanohalobium evestigatum Z-7303 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein3e-0758.2
NC_016024:1974715:1998749199874920018203072Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein3e-0758.2
NC_009464:650997:657893657893658825933Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein3e-0758.2
NC_019908:2183215:2187826218782621906032778Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein3e-0758.2
NC_015416:223968:241305241305242090786Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein4e-0757.8
NC_008435:1215437:1242247124224712444542208Rhodopseudomonas palustris BisA53, complete genomeTetratricopeptide TPR_2 repeat protein4e-0757.4
NC_013665:1591081:163807216380721638899828Methanocella paludicola SANAE, complete genomehypothetical protein9e-0756.6
NC_013665:1591081:1604503160450316056541152Methanocella paludicola SANAE, complete genomehypothetical protein1e-0656.2
NC_009425:63709:9147091470935632094Enterobacter sp. 638 plasmid pENTE01, complete sequenceTPR repeat-containing protein2e-0655.8
NC_013156:573037:593217593217594089873Methanocaldococcus fervens AG86, complete genomeTetratricopeptide TPR_2 repeat protein1e-0655.8
NC_010814:2217153:2236817223681722385171701Geobacter lovleyi SZ, complete genomeTetratricopeptide TPR_2 repeat protein1e-0655.8
NC_014408:1455851:1466636146663614677961161Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein1e-0655.8
NC_010162:2406976:241020624102062410976771Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0655.5
NC_005071:288922:3177203177203200442325Prochlorococcus marinus str. MIT 9313, complete genomeSAM (and some other nucleotide) binding motif:TPR repeat2e-0655.5
NC_012969:2136243:2137425213742521391371713Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein3e-0654.7
NC_014733:2095996:2099388209938821010671680Methylovorus sp. MP688 chromosome, complete genometetratricopeptide domain protein3e-0654.7
NC_007335:672847:689264689264690235972Prochlorococcus marinus str. NATL2A, complete genomeTPR repeat3e-0654.7
NC_000916:31459:4322743227444381212Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase4e-0654.3
NC_013943:2610902:2619455261945526209871533Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein4e-0654.3
NC_013943:2361617:236422923642292365185957Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein6e-0653.9
NC_014117:3375796:3377641337764133825454905Burkholderia sp. CCGE1002 chromosome chromosome 1, completeTetratricopeptide TPR_2 repeat protein6e-0653.9
NC_007498:2046935:205297520529752053940966Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadD6e-0653.9
NC_010084:534937:5644215644215662441824Burkholderia multivorans ATCC 17616 chromosome 1, completeTPR repeat-containing protein7e-0653.5
NC_020291:1266885:128657312865731287502930Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometetratricopeptide TPR_2 repeat protein7e-0653.5
NC_014972:2659388:2667150266715026693272178Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein8e-0653.5
NC_018012:121793:1459521459521480272076Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein9e-0653.1
NC_002977:1600350:1612101161210116137531653Methylococcus capsulatus str. Bath, complete genomeTPR domain protein1e-0553.1