Pre_GI: BLASTP Hits

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Query: NC_011751:3530954:3561880 Escherichia coli UMN026 chromosome, complete genome

Start: 3561880, End: 3562839, Length: 960

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:3161311:320687532068753207834960Escherichia coli 536, complete genomehypothetical type II secretion protein GspC8e-175612
NC_011750:3584000:360977436097743610733960Escherichia coli IAI39 chromosome, complete genomeputative type II secretion protein GspC2e-167588
NC_011745:3511600:353625335362533537212960Escherichia coli ED1a chromosome, complete genomeputative type II secretion protein GspC5e-166583
NC_012967:3012317:303902430390243039854831Escherichia coli B str. REL606 chromosome, complete genomeputative type II secretion protein GspC3e-149527
NC_008563:3362058:338865133886513389493843Escherichia coli APEC O1, complete genomeputative type II secretion protein GspC2e-142504
NC_007946:3289151:331574433157443316574831Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspC5e-141500
NC_011742:3277941:330344333034433304273831Escherichia coli S88 chromosome, complete genometype II secretion protein GspC5e-141500
NC_016612:2902628:293422329342232934714492Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein C1e-1377
NC_015061:366552:375930375930376763834Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-0756.2
NC_017047:370837:378584378584379429846Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-0755.8
NC_016818:362548:383685383685384518834Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completegeneral secretion pathway protein C5e-0755.5