Pre_GI: BLASTP Hits

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Query: NC_011660:724711:724711 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 724711, End: 725535, Length: 825

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013768:1983711:200386720038672004691825Listeria monocytogenes 08-5923, complete genomehypothetical protein5e-142503
NC_003210:1904152:191868119186811919505825Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-142503
NC_002973:1877905:189805718980571898881825Listeria monocytogenes str. 4b F2365, complete genomeSTAS domain protein7e-142503
NC_003212:1958500:197308519730851973909825Listeria innocua Clip11262, complete genomehypothetical protein3e-141500
NC_008555:1874878:189264018926401893461822Listeria welshimeri serovar 6b str. SLCC5334, complete genomeSTAS domain protein3e-105381
NC_013891:1861294:187687318768731877688816Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeSTAS domain protein2e-104379
NC_011420:365505:365505365505366332828Rhodospirillum centenum SW, complete genomesigma-B modulator protein8e-1270.9
NC_015634:2991669:301204930120493012873825Bacillus coagulans 2-6 chromosome, complete genomeanti-sigma-factor antagonist9e-1167.8
NC_019673:6394319:645032664503266451171846Saccharothrix espanaensis DSM 44229 complete genomeAnti-sigma-factor antagonist2e-0963.5
NC_014924:2517068:252303525230352523886852Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeanti-sigma-factor antagonist2e-0962.8
UCMB5137:303641:326008326008326898891Bacillus atrophaeus UCMB-5137YetI3e-0962.4
NC_008044:136844:153682153682154578897Silicibacter sp. TM1040, complete genomeanti-sigma-factor antagonist4e-0962
NC_010162:7824878:7843690784369078447571068Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-0860.8
NC_014551:691594:712981712981713847867Bacillus amyloliquefaciens DSM 7, complete genomeSulphate transporter/antisigma-factor2e-0859.7
NC_017188:635901:656305656305657171867Bacillus amyloliquefaciens TA208 chromosome, complete genomeSulphate transporter/antisigma-factor2e-0859.7
NC_017191:641923:662327662327663193867Bacillus amyloliquefaciens XH7 chromosome, complete genomeRsbR protein2e-0859.7
NC_009725:692237:717460717460718344885Bacillus amyloliquefaciens FZB42, complete genomeYetI2e-0859.7
NC_019842:680000:707185707185708051867Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-0859.7
NC_016940:3696570:369803236980323698667636Saprospira grandis str. Lewin chromosome, complete genomeanti-anti-sigma regulatory factor3e-0858.9
NC_010162:2406976:2419163241916324205211359Sorangium cellulosum 'So ce 56', complete genomepositive regulator of sigma-B3e-0858.9
NC_010162:11908749:1191809611918096119230604965Sorangium cellulosum 'So ce 56', complete genomeprotein kinase4e-0858.9
NC_020272:3245834:324583432458343246700867Bacillus amyloliquefaciens IT-45, complete genomepositive regulator of sigma-B activity6e-0858.2
NC_010162:9502480:9518094951809495231905097Sorangium cellulosum 'So ce 56', complete genomeprotein kinase1e-0757
NC_014657:473479:485782485782486474693Caldicellulosiruptor owensensis OL chromosome, complete genomeanti-sigma-factor antagonist1e-0757
NC_004193:375416:652243652243653112870Oceanobacillus iheyensis HTE831, complete genomepositive regulator of sigma-B activity2e-0756.6
NC_019896:3491000:352063835206383521462825Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeModulator protein RsbR3e-0755.8
NC_016023:1083826:1104502110450211055211020Bacillus coagulans 36D1 chromosome, complete genomeanti-sigma-factor antagonist7e-0754.7
NC_018704:347948:348751348751349620870Amphibacillus xylanus NBRC 15112, complete genomemodulator protein RsbR9e-0754.3
NC_015957:690817:706890706890707747858Streptomyces violaceusniger Tu 4113 chromosome, complete genomeanti-sigma-factor antagonist1e-0653.9
NC_010505:5525461:554987755498775550752876Methylobacterium radiotolerans JCM 2831, complete genomeanti-sigma-factor antagonist5e-0651.6