Pre_GI: BLASTP Hits

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Query: NC_011601:2998326:3003890 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 3003890, End: 3004108, Length: 219

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021066:4177217:418936241893624190264903Raoultella ornithinolytica B6, complete genomeputative transcriptional regulator9e-1889
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 14e-1580.1
NC_015138:3160764:316968131696813170574894Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator5e-1166.6
NC_015376:903939:913862913862914785924Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, LysR family2e-1064.3
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family7e-0959.3
NC_008314:2611873:262641726264172627310894Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family1e-0858.5
NC_015379:4249238:426468542646854265602918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family3e-0857.4
NC_014013:112008:129080129080130036957Sphingobium japonicum UT26S chromosome 2, complete genomeLysR-family transcriptional regulator6e-0856.2
NC_010943:1332243:133936213393621340264903Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator6e-0856.2
NC_016830:2642881:264642726464272647344918Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator2e-0754.7
NC_009524:861500:878447878447879355909Psychrobacter sp. PRwf-1 chromosome, complete genomeLysR family transcriptional regulator3e-0753.9
NC_017986:5833819:583514258351425836062921Pseudomonas putida ND6 chromosome, complete genomeNahR6e-0752.8
NC_014641:20103:310553105531963909Achromobacter xylosoxidans A8 plasmid pA81, complete sequencebacterial regulatory helix-turn-helix protein, LysR family protein 2038e-0752.4
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-0651.6
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family2e-0651.2
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family5e-0650.1