Pre_GI: BLASTP Hits

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Query: NC_011601:2139188:2163561 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 2163561, End: 2165024, Length: 1464

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:1938975:1950936195093619523991464Escherichia coli 536, complete genomePilV-like protein0855
NC_004431:2185750:2197781219778121992441464Escherichia coli CFT073, complete genomePilV-like protein0855
NC_011149:1987291:2001320200132020027561437Salmonella enterica subsp. enterica serovar Agona str. SL483,prepilin-type N- cleavage/methylation domain protein0716
NC_011745:2209288:2245708224570822472791572Escherichia coli ED1a chromosome, complete genomeputative PilV-like protein4e-115415
NC_015224:3587500:3601516360151636028321317Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Large exoprotein involved in heme utilization or adhesion7e-106384
NC_004547:1873390:1916388191638819179801593Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative type IV prepilin7e-103374
NC_013421:1696746:1710973171097317124211449Pectobacterium wasabiae WPP163, complete genomeputative type IV prepilin4e-102372
NC_011205:2180598:2193744219374421955821839Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853pilin2e-89330
NC_016831:947281:9747529747529765901839Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-89330
NC_016832:948029:9668079668079682281422Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Prepilin-type N-cleavage/methylation domain protein1e-86320
NC_009656:4527457:4611877461187746132561380Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilus protein PilV2e-1170.9
NC_008463:5246954:5286291528629152876191329Pseudomonas aeruginosa UCBPP-PA14, complete genomeType IV B pilus protein3e-1170.1
NC_004129:5373886:5408742540874254099531212Pseudomonas fluorescens Pf-5, complete genometype IV prepilin PilV, putative7e-1168.9
NC_018080:5091772:5131282513128251326611380Pseudomonas aeruginosa DK2 chromosome, complete genometype IV pilus protein PilV3e-1067
NC_005773:866157:889863889863890840978Pseudomonas syringae pv. phaseolicola 1448A, complete genometype IV pilus protein PilV2, putative, truncated3e-0860.1
NC_005126:1223042:1236988123698812381781191Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-0859.3
NC_009708:4182460:4202151420215142034281278Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeshufflon protein5e-0652.8