Pre_GI: BLASTP Hits

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Query: NC_011601:2139188:2162951 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 2162951, End: 2163508, Length: 558

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:2185750:219929721992972199854558Escherichia coli CFT073, complete genomePutative type IV pilin protein precursor2e-60231
NC_008253:1938975:195245219524521953009558Escherichia coli 536, complete genomeputative type IV pilin protein precursor2e-60231
NC_011294:2053991:206858120685812069138558Salmonella enterica subsp. enterica serovar Enteritidis strtype IV pilin5e-56216
NC_011149:1987291:200280920028092003366558Salmonella enterica subsp. enterica serovar Agona str. SL483,putative type IV pilin protein7e-56216
NC_011205:2180598:219559821955982196155558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type IV pilin protein2e-55214
NC_016831:947281:974275974275974736462Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type IV pilin3e-41167
NC_011274:2044000:205980420598042060265462Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type IV pilin2e-40164
NC_004547:1873390:191572419157241916281558Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative type IV pilin protein precursor2e-27122