Pre_GI: BLASTP Hits

Some Help

Query: NC_011593:1680215:1691018 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1691018, End: 1691632, Length: 615

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:1680344:169080816908081691422615Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage lysin5e-84310
NC_014246:1402500:141581514158151416630816Mobiluncus curtisii ATCC 43063 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-0960.5
NC_021064:2001786:201441820144182015239822Propionibacterium avidum 44067, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0859.7
NC_014039:151631:151631151631152230600Propionibacterium acnes SK137 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0858.2
NC_015673:1038673:106003910600391060875837Corynebacterium resistens DSM 45100 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0857.4
NC_010816:1319921:1323166132316613244011236Bifidobacterium longum DJO10A, complete genomePhage lysin-like lysozyme M14e-0651.2