Pre_GI: BLASTP Hits

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Query: NC_011274:2044000:2064235 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 2064235, End: 2064528, Length: 294

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:947281:970040970040970303264Salmonella enterica subsp. enterica serovar Gallinarum/pullorummembrane protein1e-44178
NC_011294:2053991:207310820731082073371264Salmonella enterica subsp. enterica serovar Enteritidis strmembrane protein1e-44178
NC_008253:1938975:195851519585151958790276Escherichia coli 536, complete genomehypothetical protein4e-40162
NC_011745:2209288:225713422571342257439306Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-39159
NC_011149:1987291:200770120077012007976276Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-38157
NC_004547:1873390:190515419051541905429276Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-34143
NC_011205:2180598:220012522001252200304180Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-26117
NC_011094:2791719:280939728093972809669273Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-0753.9
NC_011741:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-0753.9
CU928160:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein, putative membrane protein3e-0753.9
NC_010067:191190:206516206516206788273Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0753.5