Pre_GI: BLASTP Hits

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Query: NC_011205:609464:628765 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 628765, End: 628884, Length: 120

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:364981:380396380396380677282Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional activator-regulatory protein3e-1580.5
NC_011094:593100:610894610894611013120Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional activator-regulatory protein1e-1478.6
NC_011147:2496808:251169525116952511976282Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional activator-regulatory protein1e-1478.2
NC_006511:2501500:251615925161592516440282Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional activator-regulatory protein1e-1478.2
NC_010067:2529750:258673025867302587008279Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1064.7