Pre_GI: BLASTP Hits

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Query: NC_011205:609464:623435 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 623435, End: 624142, Length: 708

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:364981:373222373222373929708Salmonella enterica subsp. enterica serovar Typhimurium strgp491e-130465
NC_010067:2529750:259234825923482593055708Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-129461
NC_011601:1039500:104778010477801048487708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerecombination protein1e-127455
NC_011601:717072:726497726497727204708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerecombination protein1e-126452
NC_011601:2614691:262472926247292625436708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-126452
NC_012125:1330066:134132513413251342032708Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-126451
NC_006905:368942:379873379873380580708Salmonella enterica subsp. enterica serovar Choleraesuis strOrf-235-like protein2e-126451
NC_006511:2501500:252131625213162521894579Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-109393
NC_011147:2496808:251685225168522517430579Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-108391
NC_011083:374000:382124382124382741618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,essential recombination function protein4e-24111
NC_020054:4028444:404693140469314047455525Fibrella aestuarina BUZ 2 drat genomehypothetical protein2e-1892.8
NC_020054:4983691:499801749980174998535519Fibrella aestuarina BUZ 2 drat genomehypothetical protein5e-1891.3
NC_007964:328825:353870353870354598729Nitrobacter hamburgensis X14, complete genomehypothetical protein1e-1480.5
NC_014974:1539950:154389715438971544367471Thermus scotoductus SA-01 chromosome, complete genomeRad52/22 double-strand break repair protein4e-1375.1
NC_014960:2371989:237759423775942378367774Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1066.6
NC_011283:4212000:422470842247084225361654Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0859.3
NC_009972:606393:621672621672622127456Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein2e-0652.8