Pre_GI: BLASTP Hits

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Query: NC_011205:609464:619272 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 619272, End: 619553, Length: 282

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:2625461:263699326369932637277285Escherichia coli UTI89, complete genomehypothetical protein3e-47186
NC_011742:1177946:118417411841741184503330Escherichia coli S88 chromosome, complete genomehypothetical protein1e-46184
NC_007946:1239278:124319812431981243527330Escherichia coli UTI89, complete genomehypothetical protein1e-46184
NC_012967:786534:789498789498789782285Escherichia coli B str. REL606 chromosome, complete genomephage related protein1e-46184
NC_016860:364981:370489370489370773285Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-46183
NC_013364:2645438:265878526587852659069285Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-46182
NC_002655:1332961:133296113329611333326366Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W4e-46182
NC_011601:717072:722437722437722721285Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-45178
NC_014640:4293430:433981043398104340109300Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein1e-27122
NC_005244:37546:448864488645161276Pseudomonas sp. ND6 plasmid pND6-1, complete sequencehypothetical protein4e-2199.8