Pre_GI: BLASTP Hits

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Query: NC_011205:1107998:1127155 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1127155, End: 1128264, Length: 1110

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1006630:1026528102652810276371110Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0699
NC_005085:4499500:449974944997494500546798Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-53208
NC_013037:2231006:224823222482322249062831Dyadobacter fermentans DSM 18053, complete genomeMOSC domain containing protein7e-36151
NC_013132:153163:173480173480174271792Chitinophaga pinensis DSM 2588, complete genomeMOSC domain containing protein2e-34146
NC_013730:4955659:498182249818224982703882Spirosoma linguale DSM 74, complete genomeMOSC domain containing protein6e-34145
NC_012721:2223641:224486222448622245731870Burkholderia glumae BGR1 chromosome 2, complete genomeMOSC domain protein9e-30131
NC_009485:7827782:784560478456047846413810Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein2e-27123
NC_003888:4613000:462493246249324625816885Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-1687.8