Pre_GI: BLASTP Hits

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Query: NC_011149:3930358:3931604 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 3931604, End: 3931738, Length: 135

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:4020000:402131240213124021446135Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-1788.6
NC_011080:3976441:397768739776873977821135Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-1788.6
NC_016857:4025767:402841740284174028551135Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-1787
NC_016831:3779611:379782537978253797959135Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-1786.7
NC_011094:3887648:388889438888943889028135Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1684.7
NC_016832:3798475:381577838157783815912135Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1684.3