Pre_GI: BLASTP Hits

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Query: NC_011149:2829811:2839468 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2839468, End: 2839581, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2844883:289949528994952899608114Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-1373.9
NC_011083:2847318:290551829055182905631114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein3e-1373.9
NC_011080:2897977:290764729076472907760114Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein3e-1373.9
NC_011094:2791719:283813428381342838247114Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1373.9
NC_011205:2962270:297570129757012975814114Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853inner membrane protein3e-1373.9
NC_012125:2826624:286622228662222866335114Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1373.9
NC_016831:2779864:279329727932972793410114Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1373.9
NC_016832:2743801:275722627572262757339114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-1373.9
NC_016856:2896630:295124229512422951355114Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-1373.9
NC_016860:2917910:295457329545732954686114Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein3e-1373.9
NC_010102:2881714:289514928951492895262114Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1373.9