Pre_GI: BLASTP Hits

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Query: NC_011149:2179592:2189129 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2189129, End: 2189557, Length: 429

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:792489:807031807031807474444Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-78290
NC_006511:792543:807085807085807528444Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-78290
NC_016832:799764:814253814253814681429Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-76282
NC_004631:799810:814284814284814727444Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-76281
NC_003198:2179688:218920921892092189652444Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-76281
NC_020260:3931567:394594639459463946371426Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-1788.6
NC_020541:468584:495637495637495990354Rhodanobacter sp. 2APBS1, complete genomehypothetical protein2e-1167.8