Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1249102 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1249102, End: 1249275, Length: 174

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1903426:190892519089251909098174Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein7e-23105
NC_016831:1690811:169630416963041696477174Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-23105
NC_011205:1391971:141617414161741416347174Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-23105
NC_011080:1944226:194972519497251949898174Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein7e-23105
NC_011083:1993672:199916519991651999338174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein7e-23105
NC_016832:1090274:110693411069341107149216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-22103