Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1243476 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1243476, End: 1243787, Length: 312

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006625:63342:757057570576016312Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencehypothetical protein3e-51199
NC_013283:113660:892589259236312Cronobacter turicensis plasmid pCTU1, complete sequenceUncharacterized protein ygjN4e-48189
NC_015381:2859000:291289929128992913210312Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-34144
NC_021150:3282702:329523632952363295418183Azotobacter vinelandii CA6, complete genomehypothetical protein1e-1891.7
NC_012560:3282704:329523832952383295420183Azotobacter vinelandii DJ, complete genomehypothetical protein1e-1891.7
NC_016830:4809210:481748048174804817809330Pseudomonas fluorescens F113 chromosome, complete genometoxin-antitoxin toxin family9e-1475.5
NC_013161:4093322:410129741012974101584288Cyanothece sp. PCC 8802, complete genomehypothetical protein8e-1372.4
NC_010842:2250119:229012622901262290422297Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomehypothetical protein1e-1065.1
NC_010602:2244729:228474022847402285036297Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein1e-1065.1
NC_013959:2801557:281742528174252817709285Sideroxydans lithotrophicus ES-1 chromosome, complete genomeProtein of unknown function DUF21362e-1063.9
NC_014738:2094000:210296921029692103262294Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein6e-0959.7
NC_013959:1555799:156065515606551560957303Sideroxydans lithotrophicus ES-1 chromosome, complete genomeProtein of unknown function DUF21361e-0755.5