Pre_GI: BLASTP Hits

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Query: NC_011094:4442478:4448492 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 4448492, End: 4448605, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:4563435:457143645714364571549114Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-1373.9
NC_012125:4481808:448782244878224487935114Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1373.9
NC_011205:4564645:457264645726464572759114Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1373.9
NC_010102:4477836:448385044838504483963114Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1373.9
NC_011083:4547825:455380245538024553915114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-1373.9
NC_011080:4543000:454901345490134549126114Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1373.9
NC_016832:4368948:437488243748824374995114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1372.4
NC_016831:4367000:437320443732044373317114Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-1166.6