Pre_GI: BLASTP Hits

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Query: NC_011094:4361238:4367762 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 4367762, End: 4367902, Length: 141

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:4390315:439683943968394396979141Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1684.3
NC_016831:4286000:429268642926864292826141Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-1682.4
NC_011205:4486142:449266644926664492806141Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1582
NC_011080:4461851:446837544683754468515141Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1580.9
NC_011083:4466634:447315844731584473298141Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-1580.9
NC_016857:4491976:449850044985004498640141Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein7e-1579.3
NC_016832:4288980:429551642955164295656141Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1579.3
NC_010102:4396500:440316344031634403303141Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1579.3