Pre_GI: BLASTP Hits

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Query: NC_011094:2791719:2809397 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2809397, End: 2809669, Length: 273

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011741:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-34144
CU928160:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein, putative membrane protein1e-34144
NC_010067:191190:206516206516206788273Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-33139
NC_011149:1987291:200770120077012007976276Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-1063.2
NC_008253:1938975:195851519585151958790276Escherichia coli 536, complete genomehypothetical protein7e-0959.3
NC_011745:2209288:225713422571342257439306Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-0858.2
NC_016831:947281:970040970040970303264Salmonella enterica subsp. enterica serovar Gallinarum/pullorummembrane protein3e-0753.9
NC_011294:2053991:207310820731082073371264Salmonella enterica subsp. enterica serovar Enteritidis strmembrane protein3e-0753.9
NC_011274:2044000:206423520642352064528294Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-0753.9
NC_004547:1873390:190515419051541905429276Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-0753.5