Pre_GI: BLASTP Hits

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Query: NC_011094:1923870:1939362 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1939362, End: 1939487, Length: 126

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1903426:192005219200521920177126Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74arsenical pump membrane protein2e-1581.3
NC_016831:1690811:170742417074241707549126Salmonella enterica subsp. enterica serovar Gallinarum/pullorumarsenical pump membrane protein2e-1581.3
NC_011083:1993672:201030720103072010432126Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,arsenical pump membrane protein2e-1581.3
NC_011080:1944226:196749119674911967616126Salmonella enterica subsp. enterica serovar Newport str. SL254,arsenical pump membrane protein2e-1581.3
NC_011205:1391971:140511914051191405244126Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853arsenical pump membrane protein8e-1579
NC_010102:1137247:115709611570961157221126Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1478.6