Pre_GI: BLASTP Hits

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Query: NC_011094:1584038:1594675 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1594675, End: 1595133, Length: 459

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:3157656:317069631706963171154459Serratia marcescens FGI94, complete genomehypothetical protein1e-52204
NC_020260:3004500:301309030130903013548459Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-46184
NC_004631:948054:953533953533953919387Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-38155
NC_011294:2053991:209668920966892097075387Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-37155
NC_011274:2044000:208782220878222088208387Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-37153
NC_010634:2004653:201692320169232017261339Yersinia pseudotuberculosis PB1/+, complete genomemembrane protein1e-32138
NC_009778:567000:571993571993572448456Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-26117
NC_013956:3525711:353231635323163532783468Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-25114
NC_010694:614985:635553635553636014462Erwinia tasmaniensis, complete genomehypothetical protein7e-25112
NC_013282:923500:935522935522935968447Cronobacter turicensis, complete genomehypothetical protein2e-24111
NC_003197:3005842:304526330452633045712450Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-24111
NC_016810:3028421:306783930678393068288450Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 protein1e-24111
NC_016856:3026426:306550030655003065949450Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-24111
NC_016857:3028421:306783930678393068288450Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-24111
NC_016860:3029272:306869330686933069142450Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein1e-24111
NC_016863:2974333:301375330137533014202450Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-24111
NC_010102:2967464:300824530082453008694450Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-24111
NC_020064:521500:527477527477527920444Serratia marcescens FGI94, complete genomehypothetical protein2e-24110
NC_010067:51000:604316043160880450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-24109
NC_012214:2805297:282015128201512820522372Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein7e-1372.8
NC_016818:3986570:399737239973723997527156Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete2e-1065.1
NC_013282:551219:576260576260576403144Cronobacter turicensis, complete genomehypothetical protein2e-1064.7