Pre_GI: BLASTP Hits

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Query: NC_011092:76993:99130 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 99130, End: 99447, Length: 318

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:1795576:182337918233791823681303Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeTrbM4e-1683.6
NC_016612:5296076:529715452971545297456303Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative lipoprotein8e-1682.4
NC_009792:859228:873782873782874150369Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1375.1
NC_011283:1811000:184134018413401841642303Klebsiella pneumoniae 342 chromosome, complete genomelipoprotein2e-1374.7
NC_016818:2836851:285691528569152857217303Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeTrbM2e-1374.3
NC_012731:3411161:345957334595733459875303Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-1270.1
NC_014500:3097362:315678431567843157086303Dickeya dadantii 3937 chromosome, complete genomeIncN plasmid KikA protein1e-1168.6
NC_011745:2209288:220928822092882209593306Escherichia coli ED1a chromosome, complete genomeputative plasmid conjugation protein9e-1062.4