Pre_GI: BLASTP Hits

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Query: NC_011092:76993:85620 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 85620, End: 86108, Length: 489

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006856:26438:316243162432112489Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-71267
NC_009832:4482500:449357244935724494075504Serratia proteamaculans 568, complete genomehypothetical protein6e-32136
NC_015567:346500:381055381055381558504Serratia sp. AS9 chromosome, complete genomehypothetical protein3e-31134
NC_015566:345084:380869380869381372504Serratia sp. AS12 chromosome, complete genomehypothetical protein3e-31134
NC_015566:5197624:521268152126815213175495Serratia sp. AS12 chromosome, complete genomeoxidoreductase molybdopterin binding protein7e-26116
NC_009832:5214850:523073852307385231232495Serratia proteamaculans 568, complete genomeoxidoreductase molybdopterin binding5e-25113
NC_009076:779407:782646782646783146501Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein7e-1786.3
NC_007434:1001514:100479210047921005292501Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein7e-1786.3
NC_006350:845513:847318847318847833516Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein7e-1786.3
NC_010552:196457:214338214338214841504Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceoxidoreductase molybdopterin binding5e-1683.6
NC_020181:421941:425045425045425542498Enterobacter aerogenes EA1509E, complete genomeFIG00732374: hypothetical protein1e-1582.4
NC_016514:1183356:119059011905901191252663Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-1580.9
NC_015968:2195645:222804622280462228540495Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein5e-1580.1
NC_009668:445134:452774452774453280507Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein1e-1479
NC_009436:1679265:168910016891001689594495Enterobacter sp. 638, complete genomehypothetical protein2e-1375.1
NC_007963:1190847:119986911998691200384516Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein4e-1270.5
NC_014305:126029:134111134111134563453Erwinia billingiae Eb661 plasmid pEB170, complete sequencePutative oxidoreductase, molybdopterin binding8e-1269.7
NC_009937:673820:686185686185686706522Azorhizobium caulinodans ORS 571, complete genomeuncharacterized protein2e-0858.5
NC_010694:1250841:126288412628841263336453Erwinia tasmaniensis, complete genomehypothetical protein2e-0858.5
NC_012214:1355500:137223713722371372689453Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein6e-0650.1