Pre_GI: BLASTP Hits

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Query: NC_011083:374000:392518 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 392518, End: 392679, Length: 162

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3287671:328767132876713288246576Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator Q4e-24109
NC_011740:2072173:210218721021872102810624Escherichia fergusonii ATCC 35469, complete genomeAntitermination protein Q7e-24109
NC_009800:289000:307726307726308349624Escherichia coli HS, complete genomeantitermination protein Q6e-24109
NC_012759:4132527:414948741494874150110624Escherichia coli BW2952 chromosome, complete genomeAntitermination protein Q6e-24109
NC_012947:3015985:301790330179033018526624Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeantitermination protein6e-24109
NC_006511:2501500:250969925096992510322624Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCantitermination6e-24109
NC_011147:2496808:250523525052352505858624Salmonella enterica subsp. enterica serovar Paratyphi A strantitermination6e-24109
NC_011601:1039500:105835610583561058979624Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomelate gene regulator1e-23108
NC_013361:3112023:312051731205173121140624Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator1e-23108
NC_013364:2898964:291048229104822911105624Escherichia coli O111:H- str. 11128, complete genomeputative late gene regulator1e-23108
NC_002655:3538656:355508535550853555708624Escherichia coli O157:H7 EDL933, complete genomeputative antiterminator of prophage CP-933Y9e-24108
NC_002695:3468873:348776234877623488385624Escherichia coli O157:H7 str. Sakai, complete genomeputative antitermination protein9e-24108
NC_011353:3573641:359190835919083592531624Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantitermination protein Q9e-24108
NC_013008:3525428:354674735467473547370624Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantiterminator of prophage CP-933Y9e-24108
NC_016816:1970189:199006519900651990871807Pantoea ananatis LMG 5342, complete genomeprophage antitermination protein6e-1166.2
NC_013892:671000:692742692742693521780Xenorhabdus bovienii SS-2004 chromosome, complete genomeFels-1 prophage chaperone2e-0960.8
NC_013892:3803278:382801638280163828795780Xenorhabdus bovienii SS-2004 chromosome, complete genomeFels-1 prophage chaperone6e-0752.8
NC_013850:2182337:220660922066092207424816Klebsiella variicola At-22 chromosome, complete genomeantitermination protein1e-0651.6
NC_013282:1804909:182240218224021823232831Cronobacter turicensis, complete genomehypothetical protein3e-0650.8