Pre_GI: BLASTP Hits

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Query: NC_011083:374000:386906 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 386906, End: 387184, Length: 279

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3287671:329436532943653294643279Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage regulatory protein CII1e-43174
NC_010067:2529750:258673025867302587008279Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-42170
NC_009778:2993218:301567830156783015956279Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-23106
NC_016860:364981:380396380396380677282Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional activator-regulatory protein4e-2096.7
NC_006511:2501500:251615925161592516440282Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional activator-regulatory protein6e-2096.3
NC_011147:2496808:251169525116952511976282Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional activator-regulatory protein6e-2096.3
NC_007946:2625461:262931726293172629610294Escherichia coli UTI89, complete genomebacteriophage 343 regulatory protein CII3e-1890.5
NC_013850:1887556:190106119010611901360300Klebsiella variicola At-22 chromosome, complete genomeCII family protein3e-1890.5
NC_013008:306953:306953306953307246294Escherichia coli O157:H7 str. TW14359 chromosome, complete genomecII antiterminator protein for prophage CP-933H3e-1890.1
NC_002695:301939:303072303072303365294Escherichia coli O157:H7 str. Sakai, complete genomecII3e-1890.1
NC_002655:301940:303073303073303366294Escherichia coli O157:H7 EDL933, complete genomeputative cII antiterminator protein for prophage CP-933H3e-1890.1