Pre_GI: BLASTP Hits

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Query: NC_011035:933269:948624 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 948624, End: 948917, Length: 294

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017505:1013311:101955410195541019835282Neisseria meningitidis alpha710 chromosome, complete genomePlasmid maintenance system killer protein; Toxin higB-15e-26116
NC_013889:1159343:117679611767961177074279Thioalkalivibrio sp. K90mix chromosome, complete genome2e-1270.9
NC_021150:4201965:423159642315964231841246Azotobacter vinelandii CA6, complete genomehypothetical protein2e-1064.3
NC_012560:4201969:423160042316004231845246Azotobacter vinelandii DJ, complete genomehypothetical protein2e-1064.3
NC_008751:1736512:175446317544631754807345Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid maintenance system killer6e-0959.7
NC_016609:4233701:426332042633204263598279Niastella koreensis GR20-10 chromosome, complete genomeplasmid maintenance system killer protein3e-0753.5
NC_005126:3485330:350463235046323504922291Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-0752.8